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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942937.1_cds_XP_016486239.1_77102
CDS Infomation

[gene=LOC107806583] [db_xref=GeneID:107806583] [protein=chloride channel protein CLC-c-like] [protein_id=XP_016486239.1] [location=join(165765..165979,166831..167031,167735..167858,168854..169152,169767..170036,170559..171690,171962..172051)] [gbkey=CDS]
Sequence

ATGGAAGATCAAGGTGATATAGAGAATGAAGGAGGAGGAGGAGGAATTGGGGTGATGATA
ATGGAAAATGGCAAAGATTTGGAGAGGAATATTTCAGCGGTTTCTGAGAGCGGTGTTAGA
CAGCCATTGCTTAGTTCTAAAAGCAGAGTCAATAATACCTCACAAATTGCTATTATAGGA
GCCAATGTTTGCCCCATTGAAAGTCTTGATTATGAGATTATTGAAAATGACCTTTTCAAG
CAAGATTGGAGATCTAGGAAAAAGGTTCAGATATTTCAATATATATTCCTAAAGTGGACA
CTTGTGCTTCTTATTGGATTGAGTGTAGGGCTTGTTGGTTTCTTCTTAAACATAGCAGTG
GAAAATATTGCTGGCTTCAAGCTTCTGCTCATTAGTGACTTAATGCTTCAGGACAAGTAT
TTCCGTGGATTTGCTGCTTATGCGTGTTGCAATTTGGTTCTTGCGACTTGTGCTGGAATC
CTATGTGCATTTATTGCACCAGCAGCTGNTGTTTCCATATTTGAGCACCTTGGTGATAGG
TCATTCCTGGAAACACAAATTCTTAAACATCCGCAGATATTTGGTTCTGCTTTGGGTGTT
TCTGCTGGATTCGTTGTTGGGAAGGAAGGACCCATGGTCCATACTGGCGCTTGCATAGCA
AACTTACTTGGACAGGGCGGCTCCCGCAAGTATCATCTGACTTGGAAGTGGCTGAAGTAT
TTCAAAAATGACCGTGACCGTAGAGATTTGATTACTTGTGGTGCTGCAGCTGGTGTTGCA
GCTGCTTTCCGAGCCCCAGTCGGCGGTGTTCTTTTTGCTCTTGAAGAAGTAGCCTCATGG
TGGCGAAGTGCTCTTCTTTGGAGGACCTTCTTCTCGACTGCTGTAGTAGCTATGGTGCTC
AGATCTTTCATTGTATTCTGTCGGAGCGGGAAATGTGGACTATTTGGTCAAGGAGGTTTG
ATAATGTTTGATGTGAATTCAGGAGCACCTAATTATAACACTATAGATGTACTGGCAGTG
TTGTTAATTGGAGTTCTTGGAGGCCTTCTTGGAAGCCTTTATAATTATCTTGTGGACAAG
GTCCTCCGGACTTACAGCATCATTAATGAGAGGGGTCCTGCTTTCAAAGTCTTGCTCGTA
ATGACCATTTCAATCCTGAGTTCTCTTTGCTCGTATTGTCTACCGTGGTTTGCAACTTGC
ACACCATGTCCTGTAGGCTTGGAGGACAAGTGCCCTACTATAGGTCGCTCTGGAAACTAT
AAGAATTTCCAATGTCCAGCTGGGCATTACAATGATCTAGCCTCCCTGTTTATGAATACC
AATGACGACGCCATCCGCAATTTGTTTAGCTCAGATAATTCCAGCGAATTCCACCTCTCT
TCACTTTTTGTCTTCTTTGCTGGGGTATATTGCCTTGGCGTCGTTACCTATGGAATTGCT
ATTCCCTCTGGGCTGTTCATTCCCGTCATACTTGCTGGTGCTTCCTATGGACGTTTTGTT
GGGACTGTCTTGGGTTCGATATCCAATCTTAATAACGGTCTCTTTGCTCTCCTTGGTGCT
GCCTCCTTCCTCGGGGGTACTATGAGGATGACTGTATCCATCTGTGTCATACTACTTGAG
CTCACCGATGACCTGCTAATGCTTCCATTGGTGATGCTTGTGCTCCTTGTTTCAAAGACT
GTGGCCGACTGTTTTAACAAGGGTGTCTACGACCAGATTGTGAAAATGAAAGGCTTGCCT
TATTTGGAAGCACATGCCGAACCATACATGAGGCAATTAGTTGCAGGAGATGTTTGTTCA
GGGCCTTTAATTACATTCTCAGGTGTTGAGAAGGTAGGGAACATAATACATGCTTTGAAG
TTTACTAGACACAACGGATTTCCCGTGATTGATGCACCGCCATTCTCAGACGCACCAGAG
TTCTGTGGACTTGCTCTAAGGTCGCACCTACTTGTTTTGCTCAAAGGAAAGAAATTCACG
AAACTAAGTGTATTGAGCGGCTCCAGTATTTTGAGGAGTTTTCATGCGTTTGATTTCGCT
AAGCCAGGATCAGGGAAGGGGCCTAAGCTCGAGGATTTGTCCTTCACTGATGAGGAGATG
GAAATGTATGTAGATCTCCATCCTGTCACAAATACATCTCCATACACAGTAGTGGAAACC
ATGTCTCTGGCCAAAGCTGCAATCCTTTTTCGACAACTTGGTCTTAGACACTTGTGTGTT
GTACCAAAAAAGACTACCGGGAGGGATCCAATCGTTGGAATTTTGACAAGGCATGACTTT
ATGCCAGAGCATATAAAGGGACTGTACCCACATTTGGTCCATCACAAGTAG

Peptide Sequence

PEP ID

XP_016486239.1
PEP Infomation

PREDICTED: chloride channel protein CLC-c-like [Nicotiana tabacum]
Sequence

MEDQGDIENEGGGGGIGVMIMENGKDLERNISAVSESGVRQPLLSSKSRVNNTSQIAIIG
ANVCPIESLDYEIIENDLFKQDWRSRKKVQIFQYIFLKWTLVLLIGLSVGLVGFFLNIAV
ENIAGFKLLLISDLMLQDKYFRGFAAYACCNLVLATCAGILCAFIAPAAXVSIFEHLGDR
SFLETQILKHPQIFGSALGVSAGFVVGKEGPMVHTGACIANLLGQGGSRKYHLTWKWLKY
FKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEVASWWRSALLWRTFFSTAVVAMVL
RSFIVFCRSGKCGLFGQGGLIMFDVNSGAPNYNTIDVLAVLLIGVLGGLLGSLYNYLVDK
VLRTYSIINERGPAFKVLLVMTISILSSLCSYCLPWFATCTPCPVGLEDKCPTIGRSGNY
KNFQCPAGHYNDLASLFMNTNDDAIRNLFSSDNSSEFHLSSLFVFFAGVYCLGVVTYGIA
IPSGLFIPVILAGASYGRFVGTVLGSISNLNNGLFALLGAASFLGGTMRMTVSICVILLE
LTDDLLMLPLVMLVLLVSKTVADCFNKGVYDQIVKMKGLPYLEAHAEPYMRQLVAGDVCS
GPLITFSGVEKVGNIIHALKFTRHNGFPVIDAPPFSDAPEFCGLALRSHLLVLLKGKKFT
KLSVLSGSSILRSFHAFDFAKPGSGKGPKLEDLSFTDEEMEMYVDLHPVTNTSPYTVVET
MSLAKAAILFRQLGLRHLCVVPKKTTGRDPIVGILTRHDFMPEHIKGLYPHLVHHK

Transcript Sequence

Gene sequence data has not been registered.